William Hendrix

Research Assistant Professor

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Office:	D112 - Tech Institute
Phone:	(847) 497-2110
E-mail:	whendrix (AT) northwestern.edu

Personal Website:

Click here

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Research Interests:

• Graph algorithms
• Graph mining
• Parallel algorithms

Publications:

1. "Theoretical Underpinnings for Maximal Clique Enumeration on Perturbed Graphs;" William Hendrix, Matthew Schmidt, Paul Breimyer, Nagiza Samatova; Theoretical Computer Science, vol. 411, no. 26–28, pp. 2520–2536; 2010.
2. "On Perturbation Theory and an Algorithm for Maximal Clique Enumeration in Uncertain and Noisy Graphs;" William Hendrix, Matthew C. Schmidt, Paul Breimyer, Nagiza F. Samatova; in Proceedings of the 1st ACM SIGKDD Workshop on Knowledge Discovery from Uncertain Data, pp. 48–56; 2009.
3. "Discovery of Enriched Biological Motifs Using Knowledge Priors with Application to Biohydrogen Production;" William Hendrix, Andrea M. Rocha, Mark Elmore, Joe Trien, Nagiza F. Samatova; in Proceedings of BIOCOMP '10, pp. 17–23; 2010.
4. "Sensitive and Specific Identification of Protein Complexes in 'Perterbed' Protein Interaction Networks from Noisy Pull-Down Data;" William Hendrix, Tatiana Karpinets, Byung-Hoon Park, Eric Schendel, Alok Choudhary, Nagiza F. Samatova; HiComb 2011 (in press).
5. "Coupling Graph Perturbation Theory with Scalable Parallel Algorithms for Large-Scale Enumeration of Maximal Cliques in Biological Graphs;" Nagiza F. Samatova, Matthew C. Schmidt, William Hendrix, Paul Breimyer, Kevin Thomas, Byung-Hoon Park; Journal of Physics: Conference Series – SciDAC 2008; 2008. (invited)
6. "Systems Biology Approach to Discovery of Phenotype-Specific Metabolic Processes for Engineering Bacterial Bio-Hydrogen;" Andrea M. Rocha, William Hendrix, Matthew C. Schmidt, James R. Mihelcic, Nagiza F. Samatova; Journal of Physics 2010: Conference Series – SciDAC 2010; 2010. (invited)
7. " Biclustering-Diven Ensemble of Bayesian Belief Network Classifiers for Underdetermined Problems;" Tatdow Pansombut, William Hendrix, Zekai J. Gao, Brent E. Harrison, Nagiza F. Samatova; IJCAI 2011 (in press).
8. "Classification of Emerging Extreme Event Tracks in Multi-Variate Spatio-Temporal Physical Systems Using Dynamic Network Structures: Application to Hurricane Track Prediction;" Huseyin Sencan, Zhengzhang Chen, William Hendrix, Tatdow Pansombut, Frederick Semazzi, Alok Choudhary, Vipin Kumar, Anatoli Melechko, Nagiza F. Samatova; IJCAI 2011 (in press).
9. "Detecting and Tracking Community Dynamics in Evolutionary Networks;" Zhengzhang Chen, Kevin Wilson, Ye Jin, William Hendrix, Nagiza F. Samatova; IEEE International Conference on Data Mining Workshops, pp. 318–327; 2010
10. "The Multiple Alignment Algorithm for Metabolic Pathways without Abstraction;" Wenbin Chen, Andrea M. Rocha, William Hendrix, Matthew C. Schmidt, Nagiza F. Samatova; 2010 IEEE International Conference on Data Mining Workshops, pp.669–678; 2010.
11. " pR: Lightweight, Easy-to-Use Middleware to Plugin Parallel Analytical Computing with R;" Paul Breimyer, Guruprasad Kora, William Hendrix, Nagiza F. Samatova; in Proceedings of the 2009 International Conference on Information and Knowledge Engineering (IKE .09), vol. 2, pp. 667–673; 2009.
12. "An Outlook into Future Visualization of Large-Scale Biological Data;"Nagiza F. Samatova, Paul Breimyer, William Hendrix, Matthew C. Schmidt, Theresa-Marie Rhyne; In proceedings of Supercomputing Conference, 2008 (invited).
13. "VEMI: an Interface for Simultaneously Viewing Data in Disparate Formats;" William Hendrix; In proceedings of ACM Mid-Southeast Conference, 2006.